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VaHMP Resources

Type Description Project Link
16S 16S rRNA gene sequences (V1-V3) from the Vaginal Human Microbiome Project VaHMP SRA
WMGS Whole metagenome shotgun sequencing data from the Vaginal Human Microbiome Project VaHMP SRA
Bacterial Bacterial genomes from the Vaginal Human Microbiome Project VaHMP SRA
Bacterial Sneathia amnii Sn35 from the Vaginal Human Microbiome Project ( Version 1) VaHMP Contigs    Genes
Bacterial Sneathia amnii Sn35 from the Vaginal Human Microbiome Project ( Version 2 ) VaHMP Scaffold
dbGaP Phenotype and clinical metadata from the Vaginal Microbiome Project VaHMP dbGaP
Isolates Bacterial isolates from the Vaginal Human Microbiome Project VaHMP BEI
Software STIRRUPS Classifier and V1-V3 16S rDNA reference database for vaginal microbiome studies VaHMP SourceForge
Software BOTUX: Bayesian Operational Taxonomic Unit eXaminer VaHMP GitHub